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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015890386.1_cds_XP_016445073.1_40063
CDS Infomation

[gene=LOC107770295] [db_xref=GeneID:107770295] [protein=carboxyl-terminal-processing peptidase 1, chloroplastic-like isoform X2] [protein_id=XP_016445073.1] [location=complement(join(27131..27136,28171..28233,28314..28352,29157..29240,29371..29415,29498..29574,30297..30465,30549..30653,32220..32357,33020..33139,33245..33622))] [gbkey=CDS]
Sequence

ATGAGGCTCCTCCACAGCCCCTTACCTCCACCACTGTTAACCTCATTTGCACCGCGCAAA
ACCTCAATTCTTCCCAAAAAAGCTTCTCTCAACTATGCACAGAAACCCCTTCAACAAGCT
CTATCAACTGGGATCTCATTAGTTCTATCATTGGGGCTTCTTGTTTCTGCTCCTAATTCC
ATCTTTGCCTTGGAATCTCCTTCAGTACTTCAACCTTCTAACTCATTAAATTGCCCCGAG
AACGAGGTGGAAGAGGTGTACAGTACTGAAGTATCAAAAGTGGTGAGCAATGAAAGGATT
GTGGAAGAGGCTTGGCAGATTGTGAACGACAGTTTTCTTAACACCAGCCCTCGTTCTTGG
TCTCCCGAATCTTGGCTTAAAAAGAAAGATGACATCTTAAGTTCATCAGTTCAGACAAGG
TCAAAAGCTCATGATATCATCAAGCGGATGTTGGCTAGTTTGGGTGATCCCTATACACGT
TTTCTTTCTCCTGAAGAGTTCTCCAAGATGGCTAGATATGATATGACTGGGATTGGAGTT
AACCTCAGGGATGTTCCCGATGGCAATGGAGGTTTAAAACTGAAGGTTTTAGGTCTCCTA
TTGGATGGCCCTGCCCATACCGCTGGTGTACGACAGGGAGATGAACTAGTGTCAGTGAAT
GGGGTGAATGTGCGGGATAAATCTGCCTTTGAAGCATCTTCACTGTTACTAGGTCCAAGT
GGGACATTTGTGAACATCATGGTTAAGCATGGGAATTGTGGACCTGTTCAATCAATTGAT
GTGGAGAGGCAGTCTATTGCTAAGACGCCGGTTTTTTATCGTCTGGAGCAGATTGAAAGT
GGTTCTGTTTCTGTTGGTTATGTGCGCCTAAAGGAGTTCAATGCATTGGCCAGAAAAGAT
TTGGTTACTGCAATTAAACGACTCGAAGGCATGGGTGCCTCATCTTTTGTTCTTGATCTC
AGAGATAACCTAGGTGGACTAGTGCAGGCTGGCATTGAAATTGCGAAACTTTTTCTGGAT
GAAGGAGACACGGTGATTTCCACTGTTGGAAGGGATCCACAGTATAGAAGGAATATTGTT
GCAGAAGCTCCACCTCTTATTACAGCTCCAGTAATTGTATTGGTTAACAAAAAAACTGCA
AGTGCCAGTGAAATTGTTGCAACTGCACTTCACGATAACTGTAGAGCTGTTCTCGTGGGA
GACAAGACATATGGCAAGGACTAA

Peptide Sequence

PEP ID

XP_016445073.1
PEP Infomation

PREDICTED: carboxyl-terminal-processing peptidase 1, chloroplastic-like isoform X2 [Nicotiana tabacum]
Sequence

MRLLHSPLPPPLLTSFAPRKTSILPKKASLNYAQKPLQQALSTGISLVLSLGLLVSAPNS
IFALESPSVLQPSNSLNCPENEVEEVYSTEVSKVVSNERIVEEAWQIVNDSFLNTSPRSW
SPESWLKKKDDILSSSVQTRSKAHDIIKRMLASLGDPYTRFLSPEEFSKMARYDMTGIGV
NLRDVPDGNGGLKLKVLGLLLDGPAHTAGVRQGDELVSVNGVNVRDKSAFEASSLLLGPS
GTFVNIMVKHGNCGPVQSIDVERQSIAKTPVFYRLEQIESGSVSVGYVRLKEFNALARKD
LVTAIKRLEGMGASSFVLDLRDNLGGLVQAGIEIAKLFLDEGDTVISTVGRDPQYRRNIV
AEAPPLITAPVIVLVNKKTASASEIVATALHDNCRAVLVGDKTYGKD

Transcript Sequence

Gene sequence data has not been registered.